CHEMISTRY GLOSSARY

histidine    →   histidin

Histidine is an electrically charged amino acids with basic side chains. It is an essential amino acid, which means that humans cannot synthesize it, so it must be ingested. Histidine is perhaps the most common and versatile catalytic residue in proteins. The imidazole sidechain of histidine has a pKa of approximately 6.0. This means that, at physiologically relevant pH values, relatively small shifts in pH will change its average charge. The unprotonated imidazole is nucleophilic and can serve as a general base, while the protonated form can serve as a general acid. In addition, it is often a ligand for transition metal ions such as iron and zinc.

• Abbreviations: His, H
• IUPAC name: 2-amino-3-(1H-imidazol-5-yl)propanoic acid
• Molecular formula: C₆H₉N₃O₂
• Molecular weight: 155.15 g/mol

hydration    →   hidratacija

Hydration is addition of water or the elements of water (i.e. H and OH) to a molecular entity. The term is also used in a more restricted sense for the process:

hydrogen bond    →   vodikova veza

Hydrogen is a bond formed by a hydrogen atom to an electronegative atom, and is denoted by dashed lines H-X---H-B. A hydrogen atom covalently bound to an oxygen (electronegative atom) has a significant positive charge and can form a weak bond to another electronegative atom.

hydrolysis    →   hidroliza

Hydrolysis is a chemical reaction in which water reacts with another substance to form two or more new substances. This involves ionisation of the water molecule, as well as splitting of the compound hydrolysed, e.g.

Examples are conversion of starch to glucose by water in the presence of suitable catalysts and a reaction of the ions of a dissolved salt to form various products, such as acids, complex ions, etc.

ideal solution    →   idealna otopina

Ideal solution is a solution in which solvent-solvent and solvent-solute interactions are identical, so that properties such as volume and enthalpy are exactly additive. Ideal solutions follow Raoult’s law, which states that the vapour pressure p_i of component i is p_i = x_i p_i^*, where x_i is the mole fraction of component i and p_i^* the vapour pressure of the pure substance i.

ionic bond    →   ionska veza

Ionic bond is a strong force of attraction holding atoms together in a molecule or crystal. Typically chemical bonds have energies of about 100 kJ mol^-1. Ionic bond is a bond at which one of the participants, during the procedure of bonding, gives away its unpaired electrons to another atom so that both can achieve electron arrangement of the closest noble gas. In order to form an ionic bond one of the atoms must cross to the positively charged ion by losing certain number of electrons and the other atom must receive those electrons and cross to the negatively charged ion.

ionisation    →   ionizacija

Ionisation is the process of producing ions. Certain molecules ionise in a solution; for example, acids ionise when dissolved in water.

Electron transfer also causes ionisation in certain reactions, for example sodium and chlorine react by transfer of a valence electron from the sodium atom to the chlorine atom to form the ions that constitute a sodium chloride crystal.

isoelectric point    →   izoelektrična točka

Isoelectric point (pI or IEP) is the pH of a solution or dispersion at which the net charge on the molecules or colloidal particles is zero. In electrophoresis there is no motion of the particles in an electric field at the isoelectric point. The net charge (the algebraic sum of all the charged groups present) of any amino acid, peptide or protein, will depend upon the pH of the surrounding aqueous environment. For example, alanine can have a charge of +1, 0, or -1, depending on the pH of the solution in which it is dissolved.

isoleucine    →   izoleucin

Isoleucine is hydrophobic amino acids with aliphatic side chain. It is one of the three amino acids having branched hydrocarbon side chains. The side chains of these amino acids are not reactive but, these residues are critically important for ligand binding to proteins, and play central roles in protein stability. Isoleucine is an essential amino acid, which means that humans cannot synthesize it, so it must be ingested.

• Abbreviations: Ile, I
• IUPAC name: 2-amino-3-methylpentanoic acid
• Molecular formula: C₆H₁₃NO₂
• Molecular weight: 131.12 g/mol

ketal    →   ketal

Ketals are organic compounds formed by addition of an alcohol to a ketone. If one molecule of ketone (RR’CO) reacts with one molecule of alcohol (R"OH) then a hemiketal is formed. The rings of ketose sugars are hemiketals. Further reaction produces a full ketal (RR’C(OR")₂). This term, once abandoned, has been reinstated as a subclass of acetals.