CHEMISTRY GLOSSARY

serine    →   serin

Serine is neutral amino acids with polar side chains. It is one of two hydroxyl amino acids. Both are commonly considered to by hydrophilic due to the hydrogen bonding capacity of the hydroxyl group. Serine often serves as a nucleophile in many enzyme active sites, and is best known for its role in the serine proteases. Serine is a site of phosphorylation and glycosylation which is important for enzyme regulation and cell signaling. It is not essential to the human diet, since it is synthesized in the body from other metabolites, including glycine.

• Abbreviations: Ser, S
• IUPAC name: 2-amino-3-hydroxypropanoic acid
• Molecular formula: C₃H₇NO₃
• Molecular weight: 105.09 g/mol

sigma bond    →   sigma veza

Most single bonds are sigma bonds (σ-bond). In the valence bond theory, a sigma bond is a valence bond that is symmetrical around the imaginary line between the bonded atoms.

simple cubic lattice    →   jednostavna kubična rešetka

Simple or primitive cubic lattice (sc or cubic-P) has one lattice point at the each corner of the unit cell. It has unit cell vectors a = b = c and interaxial angels α=β=γ=90°.

The simplest crystal structures are those in which there is only a single atom at each lattice point. In the sc structures the spheres fill 52 % of the volume. The number of atoms in a unit cell is one (8×1/8 = 1). This is only one metal (α-polonium) that have the sc lattice.

sol    →   sol

Sols are dispersions of small solid particles in a liquid. The particles may be macromolecules or may be clusters of small molecules. Lyophobic sols are those in which there is no affinity between the dispersed phase and the liquid (e.g. silver chloride dispersed in water). Lyophobic sols are inherently unstable, in time the particles aggregate, and form a precipitate. Lyiophilic sols, on the other hand, are more like true solutions in which the solute molecules are large and have an affinity for the solvent (e.g. starch in water). Association colloids are systems in which the dispersed phase consists of clusters of molecules that have lyophobic and lyophilic parts (e.g. soap in water).

spectrophotometer    →   spektrofotometar

Spectrophotometer is an instrument for measuring the amount of light absorbed by a sample.

The absorption of light by a substance in a solution can be described mathematically by the Beer-Lambert law

where A is the absorbance at a given wavelength of light, ε is the molar absorbtivity or extinction coefficient (L mol^-1 cm^-1), unique to each molecule and varying with wavelength, b is the length of light path through the sample (cm), and c is the concentration of the compound in solution (mol L^-1).

starch    →   škrob

Starch (C₆H₁₀O5)_x is a polysaccharide used by plants to stockpile glucose molecules. It is the major component of flour, potatoes, rice, beans, corn, and peas. Starch is a mixture of two different polysaccharides: amylose (about 20 %), which is insoluble in cold water, and amylopectin (about 80 %), which is soluble in cold water. Amylose is composed of unbranched chains of D-glucose units joined by α(1→4)-glycosidic linkages. Unlike amylose, which are linear polymers, amylopectin contains α(1→6)-glycoside branches approximately every 25 glucose units.

Starch digestion begins in the mouth via the action of amylase, a digestive enzyme present in saliva. The process is completed in the small intestine by the pancreatic amylase. The final products of starch digestion, glucose molecules, are absorbed into the intestinal bloodstream and transported to the liver. Like most enzymes, glycosidases are highly selective in their action. They hydrolyze only the α-glycoside links in starch and leave the β-glycoside links in cellulose untouched. Starch is important food stuff and is used in adhesives, and sizes, in laundering, pharmacy and medicine.

sugar    →   šećer

Sugar is any of a group of water-soluble carbohydrates of relatively low molecular weight and typically having a sweet taste. The group comprises mainly monosaccharides (glucose, fructose, galactose), disaccharides (sucrose, lactose, maltose), and trisaccharides (raffinose). Many monosaccharides and disaccharides fairly commonly found in nature bear names reflecting the source from which they were first isolated. For example, glucose is also known as grape sugar, lactose as milk sugar, and maltose as malt sugar. In everyday usage, the name is often used to refer specifically to sucrose (table sugar, cane sugar, beet sugar).

tautomerism    →   tautomerija

Tautomerism refers to equilibrium between two different structures of the same compound. Usually the tautomers differ in the point of attachment of a hydrogen atom. One of the most common examples of a tautomeric system is the equilibrium between a ketone (keto) and aldehyde (enol).

thermosetting plastic    →   termostabilna plastika

Thermosetting plastics (thermosets) refer to a range of polymer materials that cure, through the addition of energy, to a stronger form. The energy may be in the form of heat (rubber), through a chemical reaction (two part epoxy), or irradiation. Thermoset materials are usually liquid or malleable prior to curing, and designed to be molded into their final form, or used as adhesive.

Thermoset polymer resins transformed into plastics or rubbers by cross-linking into a rigid, 3-D structure. A thermoset material cannot be melted and re-molded after it is cured.

threonine    →   treonin

Threonine is neutral amino acids with polar side chains. It differs from serine by having a methyl substituent in place of one of the hydrogens on the β carbon. Threonine is a site of phosphorylation and glycosylation which is important for enzyme regulation and cell signaling. It is an essential amino acid, which means that humans cannot synthesize it, so it must be ingested.

• Abbreviations: Thr, T
• IUPAC name: 2-amino-3-hydroxybutanoic acid
• Molecular formula: C₄H₉NO₃
• Molecular weight: 119.12 g/mol