CHEMISTRY GLOSSARY

conformation    →   konformacija

Conformation is one of the very large numbers of possible spatial arrangements of atoms that can be interconverted by rotation about a single bond in a molecule. The conformation of a molecule is not fixed, though one or another shape may be more likely to occur. There are two extreme cases:

Staggered conformation (antiperiplanar) is a conformation about a carbon-carbon single bond in which the atoms on one carbon are as far apart as possible from the atoms on an adjacent carbon.

Eclipsed conformation (syn-periplanar) is a conformation about a carbon-carbon single bond in which the atoms on one carbon are as close as possible to the atoms on an adjacent carbon.

monodentate ligand    →   monodentantni ligand

Monodentate ligand is a ligand that has only one atom that coordinates directly to the central atom in a complex. For example, ammonia and chloride ion are monodentate ligands of copper in the complexes [Cu(NH₃)₆]²⁺ and [CuCl₆]²⁺.

non-polar solvent    →   nepolarno otapalo

Non-polar solvent is a liquid with non-polar molecules. It dissolves covalent compounds, non-water solvent.

olefin    →   olefin

Olefins are acyclic and cyclic hydrocarbons having one or more carbon-carbon double bonds, apart from the formal ones in aromatic compounds. The class olefins subsume alkenes and cycloalkenes and the corresponding polyenes.

oligosaccharide    →   oligosaharid

Oligosaccharides are carbohydrates containing from three to ten monosaccharide units, each joined to the next by a glycoside bond.

oxonium ion    →   oksonijev ion

Oxonuim ion (H₃O⁺) is formed when a molecule of water binds with a proton.

deoxyribonucleic acid    →   dezoksiribonukleinska kiselina

Deoxyribonucleic acid (DNA) is a nucleic acid with 2-deoxy-D-ribose as the sugar in its nucleotides. DNA contains encoded genetic information, specifically templates for the synthesis of all of an organism’s proteins and enzymes.

DNA was first identified in the 1869 by Swiss chemist Friedrich Miescher (1844-1895). In 1953, American biologist James Dewey Watson (1928-) and English physicist Francis Harry Compton Crick (1916–2004) had discovered that DNA occurs in the cell as a double helix, with two long strands of the molecule wound around each other, and further that the chemical structure of the molecule dictates that adenine (A) always aligns or pairs with thymine (T), and cytosine (C) always pairs with guanine (G). It is this base pairing that allows DNA in a cell to copy itself, and transfer its information to a new cell. The diameter of the helix is 2.0 nm and there is a residue on each chain every 0.34 nm in the z direction. The angle between each residue on the same strand is 36°, so that the structure repeats after 10 residues (3.4 nm) on each strand.

diagenesis    →   dijageneza

Diagenesis is the process that turns sediments into sedimentary rocks. The lithification (literally turning into stone) of the sediments is usually accomplished by a cementing agent. How the weight of the overlying material increases the grains closer together, reducing pore space and eliminating some of the contained water. This water may carry mineral components in solution, and these constituents precipitate as new minerals in the pore spaces. This causes cementation, which will then start to bind the individual particles together. Further compaction and burial may cause recrystallization of the minerals to make the rock even harder.

phenols    →   fenoli

Phenols are compounds having one or more hydroxy groups attached to benzene or other arene ring.

polyens    →   polieni

Polyens are unsaturated acyclic compounds with many conjugated double connections between atoms of carbon (CH₂=CH-CH=CH-CH=CH₂).