CHEMISTRY GLOSSARY

methionine    →   metionin

Methionine is neutral amino acids with polar side chains. It is one of the two sulfur-containing amino acids. Methionine is a fairly hydrophobic amino acid and typically found buried within the interior of a protein. It can form stacking interactions with the aromatic moieties of tryptophan, phenylalanine, and tyrosine. It is an essential amino acid, which means that humans cannot synthesize it, so it must be ingested.

• Abbreviations: Met, M
• IUPAC name: 2-amino-4-methylsulfanylbutanoic acid
• Molecular formula: C₅H₁₁NO₂S
• Molecular weight: 149.21 g/mol

Moh’s scale    →   Mohsova skala

Mohs’ scale of mineral hardness characterises the scratch resistance of various minerals through the ability of a harder material to scratch a softer. It was created by the German mineralogist Friedrich Mohs (1773-1839). Mohs based the scale on the ten readily available minerals.

molecular shape    →   oblik molekule

Molecular shape is the three dimensional arrangement of atoms in space around a central atom. The molecular formula of a substance does not give an indication of its shape. For example, CO₂ is a linear molecule, but SO₂ is angular.

The three-dimensional shapes of many small molecules can be predicted by applying the valence shell electron pair repulsion theory (VSEPR). When atoms combine to form molecules, pairs of valence electrons arrange themselves as far from each other as possible. Another way to characterize molecular shape is in terms of hybrid orbitals.

monosaccharide    →   monosaharid

Monosaccharides are carbohydrates, with the general formula C_n(H₂O)_n, that cannot be decomposed to a simpler carbohydrates by hydrolysis.

Depending on whether the molecule contains an aldehyde group (-CHO) or a ketone group (-CO-) monosaccharide can be a polyhydroxy aldehyde (aldose) or a polyhydroxy ketone (ketose). These aldehyde and ketone groups confer reduction properties on monosaccharides. They are also classified according to the number of carbon atoms they contain: trioses have three carbon atoms, tetroses four, pentoses five, hexoses six, heptoses seven, etc. These two systems of classification are often combined. For example, a six-carbon polyhydroxy aldehyde such as D-glucose is an aldohexose, whereas a six-carbon polyhydroxy ketone such as D-fructose is a ketohexose.

The notations D and L are used to describe the configurations of carbohydrates. In Fischer projections of monosaccharides, the carbonyl group is always placed on top (in the case of aldoses) or as close to the top as possible (in the case of ketoses). If the OH group attached to the bottom-most asymmetric carbon (the carbon that is second from the bottom) is on the right, then the compound is a D-sugar. If the OH group is on the left, then the compound is an L-sugar. Almost all sugars found in nature are D-sugars.

Monosaccharides can exist as either straight-chain or ring-shaped molecules. During the conversion from straight-chain form to cyclic form, the carbon atom containing the carbonyl oxygen, called the anomeric carbon, becomes a chiral center with two possible configurations (anomers), α and β. When the stereochemistry of the first carbon matches the stereochemistry of the last stereogenic center the sugar is the α-anomer when they are opposite the sugar is the β-anomer.

mutarotation    →   mutarotacija

Mutarotation is the change in optical rotation accompanying epimerization. In carbohydrate chemistry this term usually refers to epimerization at the hemiacetal carbon atom. In general α- and β-form are stable solids, but in solution they rapidly equilibrate. For example, D-glucose exists in an equilibrium mixture of 36 % α-D-glucopyranose and 64 % β-D-glucopyranose, with only a tiny fraction in the open-chain form. The equilibration occurs via the ring opening of the cyclic sugar at the anomeric center with the acyclic form as the intermediate. Mutarotation was discovered by French chemist Augustin-Pierre Dubrunfaut (1797-1881) in 1846.

niobium    →   niobij

Niobium was discovered by Charles Hatchett (England) in 1801. The origin of the name comes from the Greek word Niobe meaning daughter of Tantalus in Greek mythology (tantalum is closely related to niobium in the periodic table). It is shiny white, soft, ductile metal. Exposed surfaces form oxide film. Niobium occurs in a mineral columbite. It is used in stainless steel alloys for nuclear reactors, jets and missiles. Used as an alloy with iron and nickel. It can be used in nuclear reactors and is known to be superconductive when alloyed with tin, aluminium or zirconium.

nonpolar molecule    →   nepolarna molekula

Nonpolar molecule is a molecule which has no separation of charge, so no positive or negative poles are formed. For example, the Cl₂ molecule has no polar bonds (molecule with one type of atom), CH₄ is a non-polar molecule (due to its symmetry). Nonpolar molecules do not dissolve in water as they cannot form hydrogen bonds (thus are hydrophobic) but do dissolve in lipids or fats (lipophilic).

nuclear magnetic resonance    →   nuklearna magnetska rezonancija

Nuclear magnetic resonance (NMR) is a type of radio-frequency spectroscopy based on the magnetic field generated by the spinning of electrically charged atomic nuclei. This nuclear magnetic field is caused to interact with a very large (1 T - 5 T) magnetic field of the instrument magnet. NMR techniques have been applied to studies of electron densities and chemical bonding and have become a fundamental research tool for structure determinations in organic chemistry.

nuclear reactor    →   nuklearni reaktor

Nuclear reactor is an assembly of fissionable material (uranium-235 or plutonium-239) designed to produce a sustained and controllable chain reaction for the generation of electric power.

The essential components of a nuclear reactor are:

1. The core, metal rods containing enough fissionable material to maintain a chain reaction at the necessary power level (as much as 50 t of uranium may be required).
2. A source of neutrons to initiate the reaction (such as a mixture of polonium and beryllium)
3. A moderator to reduce the energy of fast neutrons for more efficient fission (material such as graphite, beryllium, heavy water, and light water are used)
4. A coolant to remove the fission-generated heat (water, sodium, helium, and nitrogen may be used)
5. A control system such as rods of boron or cadmium that have high capture cross sections (to absorb neutrons)
6. Adequate shielding, remote-control equipment, and appropriate instrumentation are essential for personnel safety and efficient operation.

nucleic acid    →   nukleinska kiselina

Nucleic acids are a complex, high-molecular-weight biochemical macromolecules composed of nucleotide chains that convey genetic information. The most common nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). Each nucleic acid chain is composed of subunits called nucleotides, each containing a sugar, a phosphate group, and nitrogenous base. DNA was first discovered in 1869 by the Swiss biochemist Friedrich Miescher (1844-1895).

Both DNA and RNA contain the two major purine bases adenine (A) and guanine (G) and one of the major pyrimidines, cytosine (C). Of the other two pyrimidines, thymine (T) is found in DNA and uracil (U) is found in RNA. There are two major pentoses in nucleic acids:2'-deoxy-D-ribose in DNA and D-ribose in RNA.

Nucleotides are linked together in both DNA and RNA in a polymeric fashion via covalent bonds. These bonds exist through phosphate-group bridges in which the 5' hydroxyl group of one nucleotide unit is joined to the 3' hydroxyl group of the next nucleotide. RNA is usually a single-stranded molecule, whereas DNA is usually double-stranded.