CHEMISTRY GLOSSARY

standard deviation    →   standardna devijacija

Standard deviation (σ) is a measure of the dispersion of a set of data from its mean. Standard deviation is a statistical term that measures the amount of variability or dispersion around an average

Suppose there are many measurements of a quantity presumed to be similar, like the size of peas in a pod. If the number of readings for each size were plotted, a bell-shaped curve would probably result, with a few small and large peas and most clustered around the average size. Around two-thirds of all measurements fall in the range spanned by the standard deviation, a measure of the spread.

sugar    →   šećer

Sugar is any of a group of water-soluble carbohydrates of relatively low molecular weight and typically having a sweet taste. The group comprises mainly monosaccharides (glucose, fructose, galactose), disaccharides (sucrose, lactose, maltose), and trisaccharides (raffinose). Many monosaccharides and disaccharides fairly commonly found in nature bear names reflecting the source from which they were first isolated. For example, glucose is also known as grape sugar, lactose as milk sugar, and maltose as malt sugar. In everyday usage, the name is often used to refer specifically to sucrose (table sugar, cane sugar, beet sugar).

threonine    →   treonin

Threonine is neutral amino acids with polar side chains. It differs from serine by having a methyl substituent in place of one of the hydrogens on the β carbon. Threonine is a site of phosphorylation and glycosylation which is important for enzyme regulation and cell signaling. It is an essential amino acid, which means that humans cannot synthesize it, so it must be ingested.

• Abbreviations: Thr, T
• IUPAC name: 2-amino-3-hydroxybutanoic acid
• Molecular formula: C₄H₉NO₃
• Molecular weight: 119.12 g/mol

toxin    →   toksin

Toxins are effective and specific poisons produced by living organisms. They usually consist of an amino acid chain which can vary in molecular weight between a couple of hundred (peptides) and one hundred thousand (proteins). They may also be low-molecular organic compounds. Toxins are produced by numerous organisms, e.g., bacteria, fungi, algae and plants. Many of them are extremely poisonous, with a toxicity that is several orders of magnitude greater than the nerve agents. Botulinum toxin, produced by the bacteria Clostridium botulinum, is the most poisonous substance known.

tryptophan    →   triptofan

Tryptophan is hydrophobic amino acids with aromatic side chain. Tryptophan is large aromatic residue that is normally found buried in the interior of a protein and is important for protein stability. Tryptophan has the largest side chain and is the least common amino acid in proteins. It has spectral properties that make it the best inherent probe for following protein folding and conformational changes associated with biochemical processes. It is an essential amino acid, which means that humans cannot synthesize it, so it must be ingested.

• Abbreviations: Trp, W
• IUPAC name: 2-amino-3-(1H-indol-3-yl)propanoic acid
• Molecular formula: C₁₁H₁₂N₂O₂
• Molecular weight: 204.23 g/mol

tyrosine    →   tirozin

Tyrosine is hydrophobic amino acids with aromatic side chain. Tyrosine is large aromatic residue that is normally found buried in the interior of a protein and is important for protein stability. Tyrosine has special properties since its hydroxyl side chain may function as a powerful nucleophile in an enzyme active site (when ionized) and is a common site for phosphorylation in cell signaling cascades. Tyrosine absorbs ultraviolet radiation and contributes to the absorbance spectra of proteins. It is not essential (or semi-essential) to the human diet, since it is synthesized in the body from other metabolites.

• Abbreviations: Tyr, Y
• IUPAC name: 2-amino-3-(4-hydroxyphenyl)propanoic acid
• Molecular formula: C₉H₁₁NO₃
• Molecular weight: 181.19 g/mol

U-tube manometer    →   U-manometar

U-tube manometer contains water or mercury in a U-shaped tube, and is usually used to measure gas pressure. One end of the U tube is exposed to the unknown pressure field (P) and the other end is connected to a reference pressure source (usually atmospheric pressure) (P_ref), shown in the schematic below.

If fluid C is the atmosphere, fluid B is the liquid in the U tube (e.g. water or mercury), and fluid A is a gas, then we can assume that ρB >> ρA, ρC. The pressure contributed by the weight of gas within the U tube can therefore be neglected. The gage pressure of the gas can be approximated by,

volumetric flask    →   odmjerna tikvica

Volumetric flasks are bottles made of glass, in a pear like in shape with long thin necks and flat bottoms. All come with a ground glass stopper for a tight seal. Volume marking is cut in glass with fluoride acid around the neck, so that parallax should be avoided (flask is put in front of the eyes so that one can see only a straight horizontal line). A volumetric flask is calibrated to contain (TC or In) the indicated volume of water at 20 °C when the bottom of the meniscus is adjusted to just rest on the center of the line marked on the neck of the flask. They are used for preparing the exactly known volume of sample solution and standard solutions of reagents. On each flask with volume designation a temperature on which the flask has been calibrated is designated.